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Seminars (PLG)

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Event When Speaker Title Presentation Material
PLGW01 3rd September 2007
10:00 to 11:00
T Warnow Computational and mathematical challenges involved in very large-scale phylogenetics
PLGW01 3rd September 2007
11:30 to 11:50
DH Huson Dendroscope - an interactive viewer for large phylogenetic trees
PLGW01 3rd September 2007
11:50 to 12:10
B Holland Appropriate models for heterogeneous multi-gene data sites
PLGW01 3rd September 2007
12:10 to 12:30
H Li Incorporating speices phylogeny in the reconstruction of gene trees
PLGW01 3rd September 2007
14:00 to 15:00
M Pagel Mixture models in phylogenetic inference
PLGW01 3rd September 2007
15:30 to 15:50
G Margos Multilocus sequence analysis of Borrelia burgdorferi s.l.
PLGW01 3rd September 2007
15:50 to 16:10
K St John Comparing phylogenetic trees
PLGW01 3rd September 2007
16:10 to 16:30
B Chor Phylogenetic reconstructions based on RNA secondary structure
PLGW01 4th September 2007
09:00 to 10:00
O Gascuel Advances and limitations of maximum likelihood phylogenetics
PLGW01 4th September 2007
10:00 to 10:20
SJ Willson Restrictions on meaningful phylogenetic networks
PLGW01 4th September 2007
10:20 to 10:40
K Huber Inference rules for super-network construction
PLGW01 4th September 2007
10:40 to 11:00
S Snir Maximum parsimony on phylogenetic networks: some rigorous results
PLGW01 4th September 2007
11:30 to 11:50
D Gusfield Integer programming for phylogenetic computations
PLGW01 4th September 2007
11:50 to 12:10
S Grunewald Quartet compatability: new results and surprising counterexamples
PLGW01 4th September 2007
12:10 to 12:30
A Brandstaedt On k-leaf powers
PLGW01 4th September 2007
14:00 to 15:00
G Valiente Tripartitions in phylogenetic networks
PLGW01 4th September 2007
15:30 to 15:50
F Pardi Branch and bound construction of balanced minimum evolution optimal trees
PLGW01 4th September 2007
15:50 to 16:10
T Gernhard New analytical results for the speciation times in neutral models
PLGW01 4th September 2007
16:10 to 16:30
R Yoshida Partitioning the sample space on five taxa for the neighbour joining algorithm
PLGW01 5th September 2007
09:00 to 10:00
M Kucera Reconstruction of phylogeny by stratophenetic tracing in the fossil record and its comparison with molecular data
PLGW01 5th September 2007
10:00 to 10:20
M Mariadassou Explicit bounds for the stability of maximum likelihood trees
PLGW01 5th September 2007
10:20 to 10:40
D Metzler Insertion-deletion models for dequence evolution and Bayesian sampling methods for multiple alignment
PLGW01 5th September 2007
10:40 to 11:00
E Allman Indentifiability of the GTR=gamma substitution model of DNA evolution
PLGW01 5th September 2007
11:30 to 12:30
J Hein Likelihood calculations on the ancestral recombination graph
PLGW01 6th September 2007
09:00 to 10:00
DP Posada Model averaging in phylogenies
PLGW01 6th September 2007
10:00 to 10:20
FA Matsen Glimpses from the strange world of phylogenetic mixtures
PLGW01 6th September 2007
10:20 to 10:40
S Moran Neighbor joining algorithms for inferring phylogenies via LCA-distances
PLGW01 6th September 2007
10:40 to 11:00
I Gronau Reconstruction of phylogenetic trees with very short branches
PLGW01 6th September 2007
11:30 to 11:50
C Semple Nature reserve selection problems
PLGW01 6th September 2007
11:50 to 12:10
A Spillner Computing phylogenetic diversity for split systems
PLGW01 6th September 2007
12:10 to 12:30
K Hartmann Prioritising species for biodoversity conservation
PLGW01 6th September 2007
14:00 to 15:00
AG Rodrigo Big trees: challenges and opportunites in the phylogenetic analysis of large data sets
PLGW01 6th September 2007
15:30 to 15:50
BC Emerson Mitochondrial DNA heteroplasmy and recombination in a reptilian secondary contact zone
PLGW01 6th September 2007
15:50 to 16:10
M Wilkinson Generalising from consensus to supertree methods
PLGW01 7th September 2007
09:00 to 10:00
I Ebersberger Mapping human genetic ancestry
PLGW01 7th September 2007
10:00 to 10:20
M Bordewich Consistency of phylogenetic tree search algorithms based on the balanced minimum evolution principle
PLGW01 7th September 2007
10:20 to 10:40
A Lesser Optimal and hereditarily optimal realisation of metric spaces
PLGW01 7th September 2007
10:40 to 11:00
P Humphries Properties of the TBR metric
PLGW01 7th September 2007
11:30 to 12:30
M Steel Stars, nets, and the "war on error": Six mathematical challenges
PLG 11th September 2007
10:00 to 12:00
D Gusfield Informal discussions on Phylogenetic networks
PLG 11th September 2007
14:00 to 15:00
G Nicholls Some Monte Carlo methods for phylogenetic problems
PLG 17th September 2007
10:00 to 12:00
M Steel Informal discussions on Phylogenetic networks
PLG 18th September 2007
14:00 to 15:00
D Huson Taxonomy and Phylogenetics in Metagenomics
PLG 25th September 2007
14:00 to 15:00
C Semple Recovering reticulation: a theoretical algorithm for a practical problem
PLG 2nd October 2007
14:00 to 15:00
E Mossel Phylogenetic problems via telescopic lens
PLG 9th October 2007
14:00 to 15:00
SJ Willson Reconstruction of certain normal networks from the genomes at leaves
PLG 11th October 2007
11:30 to 13:00
M Steel & V Moulton & D Huson Phylogenetics: interactions between mathematics and evolution
PLG 16th October 2007
14:00 to 15:00
E Allman On the identifiability of substitution models
PLG 30th October 2007
14:00 to 15:00
LA Szekely Phylogeny reconstruction, distinguishing and decision problems
PLG 6th November 2007
14:00 to 15:00
A von Haeseler Walking through tree-space and stopping in time
PLG 13th November 2007
14:00 to 15:00
S Kelk Worst-case optimal approximation algorithims for maximising triplet consistency within phylogenetic networks
PLG 20th November 2007
14:00 to 15:00
L Stougie Constructing level-2 phylogenetic trees from triplets
PLG 27th November 2007
14:00 to 15:00
A Dress Hao Bailin's whole-genome based phylogenies
PLG 3rd December 2007
17:00 to 18:00
A Dress Phylogenetic Nets: Examples and Theoretical Results
PLG 4th December 2007
14:00 to 15:00
T Warnow New methods for estimating language evolution
PLGW04 6th December 2007
13:00 to 14:00
P Lockhart Phylogenetic models and the origins of chloroplasts
PLGW04 6th December 2007
14:00 to 15:00
T Warnow Algorithm design for large-scale phylogenetic analysis
PLGW04 6th December 2007
15:30 to 16:30
JA Rhodes Phylogenetic models and algebra
PLGW04 6th December 2007
16:30 to 17:30
A Dress Phylogenetic combinatorics: analysing branching patterns in evolutionary trees
PLG 11th December 2007
14:00 to 15:00
K St John Approximating phylogenetic tree distances
PLGW03 17th December 2007
10:00 to 11:00
T Warnow The tree of life: algorithmic and software challenges
PLGW03 17th December 2007
11:30 to 11:50
T Nye Seeing the wood for trees: analysing multiple alternative phylogenies
PLGW03 17th December 2007
11:50 to 12:10
J Fernandez-Sanchez Performance of new invariant methods for phylogenetic reconstuction
PLGW03 17th December 2007
14:00 to 14:20
W Gilks Incorporating uncertainty in distance-matrix phylogenetic reconstruction
PLGW03 17th December 2007
14:20 to 14:40
I Gronau Adaptive fast convergence - towards optimal reconstruction guarantees for Phylogenetic trees
PLGW03 17th December 2007
14:40 to 15:00
S Moran On the hardness of inferring Phylogenies from triplet-dissimilarities
PLGW03 17th December 2007
15:30 to 15:50
M Lacey A signal-to-noise analysis of phylogeny estimation by neighbour-joining
PLGW03 17th December 2007
15:50 to 16:10
M Fischer How many characters are needed to recontruct the true tree?
PLGW03 17th December 2007
16:10 to 16:30
G Naylor The deep phylogeny problem and its consequences
PLGW03 17th December 2007
16:30 to 16:50
P Lockhart On the nature of heterotachy
PLGW03 18th December 2007
09:00 to 10:00
A Dress Recent progress in phylogenetic combinatorics
PLGW03 18th December 2007
10:00 to 10:20
A Kupczok An exact algorithm for computing the geodesic distance between phylogenetic trees
PLGW03 18th December 2007
10:20 to 10:40
M Owen Practical distance computation in the space of phylogenetic trees
PLGW03 18th December 2007
10:40 to 11:00
J Koolen Optimal realisations
PLGW03 18th December 2007
11:30 to 11:50
J Rhodes The identifyability of matrix parameters for covarion-like models
PLGW03 18th December 2007
11:50 to 12:10
M Bordewich Optimising phylogenetic diversity across two trees
PLGW03 18th December 2007
14:00 to 14:20
R Yoshida On the optimality of the neighbour-joining algorithm
PLGW03 18th December 2007
14:20 to 14:40
V Moulton Encoding phylogenetic trees with weighted quartets
PLGW03 18th December 2007
14:40 to 15:00
C Semple Identifying Phylogenies: extending the notion of unique
PLGW03 18th December 2007
15:30 to 15:50
P Wagner On (k.l)-leaf powers
PLGW03 18th December 2007
15:50 to 16:20
C Howe Phylogenetics of medieval manuscripts
PLGW03 19th December 2007
09:00 to 10:00
D Aldous Some broad questions about the tree of life
PLGW03 19th December 2007
10:00 to 10:20
T Gernhard Ranked tree shapes, shuffles, and a new test for neutrality
PLGW03 19th December 2007
10:20 to 10:40
B Faller Distribution of phylogenetic diversity under random extinction
PLGW03 19th December 2007
11:10 to 11:30
A von Haeseler 10 Men and 1 woman?
PLGW03 20th December 2007
09:00 to 10:00
A Roger Markov models of protein evolution: Lets get real!
PLGW03 20th December 2007
10:00 to 10:20
T Gesell A phylogenetic definition of structure and further animations on the sequence space
PLGW03 20th December 2007
10:20 to 10:40
L Zhang Selecting genomes for reconstruction of ancestral genomes
PLGW03 20th December 2007
10:40 to 11:00
D Catanzaro MIP models for phylenetic reconstruction under minimum evolution
PLGW03 20th December 2007
11:30 to 11:50
G Baele Challenges in modeling context-dependent evolution
PLGW03 20th December 2007
11:50 to 12:10
S Whelan A simple model for a complex world
PLGW03 20th December 2007
14:00 to 14:20
E Nisbet Evolution of Chloroplasts
PLGW03 20th December 2007
14:20 to 14:40
K St John Untangling tanglegrams
PLGW03 20th December 2007
14:40 to 15:00
S Linz Hybridisation in non-binary trees
PLGW03 20th December 2007
15:30 to 15:50
D Huson Phylogenetic networks
PLGW03 20th December 2007
15:50 to 16:10
S Willson Reconstruction of certain phylogenetic networks from the genomes at leaves
PLGW03 21st December 2007
09:00 to 10:00
N Rosenberg Lineage sorting and multi-species coalescent models
PLGW03 21st December 2007
10:00 to 10:20
J Degnan Coalescent consequences for consensus cladograms
PLGW03 21st December 2007
10:20 to 10:40
C Kosiol The influence of effective population size on a genome-wide positive selection scan
PLGW03 21st December 2007
10:40 to 11:00
Y Song A genealogical approach to studying asexuality
PLGW03 21st December 2007
11:30 to 11:50
A Labarre Minimum common supergraphs and haplotype networks
PLGW03 21st December 2007
11:50 to 12:10
E Mossel Incomplete lineage sorting: consistent phylogeny estimation from multiple loci
PLGW05 20th June 2011
10:00 to 11:00
DM Gusfield Recent Progress on Multi-State Perfect Phylogeny (Compatibility) Problems
PLGW05 20th June 2011
11:30 to 11:50
ML Bonet The Complexity of the uSPR distance
PLGW05 20th June 2011
11:50 to 12:10
M Fischer Revisiting the question how many characters are needed to reconstruct the true tree
PLGW05 20th June 2011
12:10 to 12:30
S Linz On the Complexity of the Quartet Challenge
PLGW05 20th June 2011
15:30 to 15:50
K Huber Metrics on Multi-labeled Trees: Interrelationships and Diameter Bounds
PLGW05 20th June 2011
15:50 to 16:10
M Thuillard Identifying Lateral Transfers with Neighbor-Nets
PLGW05 20th June 2011
16:10 to 16:30
K St John Exploring Treespace
PLGW05 20th June 2011
16:30 to 16:50
B Eldon Concordance between species trees and gene trees with multiple mergers of ancestral lineages
PLGW05 20th June 2011
16:50 to 17:10
E Loza Quantifying diversity and abundance in soil microbial communities from high-throughput sequence data
PLGW05 21st June 2011
09:00 to 10:00
L Nakhleh Reconciling Gene Trees in the Presence of Incomplete Lineage Sorting and Hybridization
PLGW05 21st June 2011
10:00 to 10:20
P Gambette Quartets and unrooted phylogenetic networks
PLGW05 21st June 2011
10:20 to 10:40
SM Kelk On the elusivity of softwired clusters
PLGW05 21st June 2011
10:40 to 11:00
F Lam Ancestral Recombination Graphs for Missing and Removable Data
PLGW05 21st June 2011
11:30 to 11:50
C Scornavacca Tanglegrams for Rooted Phylogenetic Trees and Networks
PLGW05 21st June 2011
11:50 to 12:10
A Spillner Visualizing reticulate evolution with planar split networks
PLGW05 21st June 2011
12:10 to 12:30
S Willson Reconstructing the parameters of a network from its tree-average distances
PLGW05 21st June 2011
14:00 to 15:00
BR Holland Phylogenies from DArTs: A stochastic Dollo proces with censored data
PLGW05 21st June 2011
15:30 to 15:50
S Herrmann Phylogenetic trees and k-dissimilarity maps
PLGW05 21st June 2011
15:50 to 16:10
E Jewett Corrections to a class of methods for inferring species trees from gene trees
PLGW05 21st June 2011
16:10 to 16:30
A Kupczok Modeling the Evolutionary Dynamics of CRISPR spacers
PLGW05 21st June 2011
16:30 to 16:50
T Nye Principal components analysis in tree space
PLGW05 21st June 2011
16:50 to 17:10
L Jermiin New methods of identifying fast-evolving sites in aligned sequence data
PLGW05 22nd June 2011
09:00 to 10:00
A von Haeseler Evaluating the goodness of fit between a phylogenetic model and an alignment
PLGW05 22nd June 2011
10:00 to 10:20
T Downing Genome sequencing of Leishmania donovani clinical lines reveals dynamic phylogenetic variation
PLGW05 22nd June 2011
10:20 to 10:40
AD Drummond Bayesian time-tree priors
PLGW05 22nd June 2011
10:40 to 11:00
D Kühnert Phylodynamic inference - accounting for the interaction of evolutionary and ecological processes
PLGW05 22nd June 2011
11:30 to 12:30
G Valiente Sequence Classification using Reference Taxonomies
PLGW05 22nd June 2011
14:00 to 15:00
O Gascuel Modelling protein evolution
PLGW05 22nd June 2011
15:00 to 15:20
B Blackburne An empirical study of the effect of sequence alignment on phylogenetic analysis
PLGW05 22nd June 2011
16:00 to 17:00
JO McInerney Are there alternatives to handling site-to-site rate variation in evolutionary characters
PLGW05 23rd June 2011
09:00 to 10:00
A Mooers Trees as representations of evolutionary information worth keeping
PLGW05 23rd June 2011
10:00 to 10:20
W Hordijk Speciation & Extinction Rate Estimation from Phylogenetic Trees
PLGW05 23rd June 2011
10:20 to 10:40
Y Wu Coalescent-based Species Tree Inference from Gene Tree Topologies Under Incomplete Lineage Sorting by Maximum Likelihood
PLGW05 23rd June 2011
10:40 to 11:00
T Wu Tree reconciliations: beyond the LCA mapping
PLGW05 23rd June 2011
11:30 to 11:50
J Sumner A Lie algebraic classification of continuous-time Markov models
PLGW05 23rd June 2011
11:50 to 12:10
E Czabarka A generalization of Stirling numbers and distribution of phylogenetic trees
PLGW05 23rd June 2011
12:10 to 12:30
T Stadler Mammalian phylogeny reveals recent diversi cation rate shifts
PLGW05 23rd June 2011
14:00 to 15:00
D Huson Integrative analysis if environmental sequences
PLGW05 24th June 2011
09:00 to 10:00
O Bininda-Emonds Assessing the limits of phylogenomics: can too much data be a bad thing?
PLGW05 24th June 2011
10:20 to 10:40
D Doerr Stochastic Errors vs. Modeling Errors in Distance Based Phylogenetic Reconstructions
PLGW05 24th June 2011
10:40 to 11:00
F Pardi The combinatorics of distance-based tree inference
PLGW05 24th June 2011
11:30 to 12:30
T Warnow Estimating ultra-large phylogenies and alignments
University of Cambridge Research Councils UK
    Clay Mathematics Institute London Mathematical Society NM Rothschild and Sons