An Isaac Newton Institute Workshop

Recent Advances in Monte Carlo Based Inference

MCMC for doubly-intractable distributions

Authors: Iain Murray (Gatsby Unit, University College London), Zoubin Ghahramani (University of Cambridge), David J. C. MacKay (University of Cambridge)

Abstract

Markov Chain Monte Carlo (MCMC) algorithms are routinely used to draw samples from distributions with intractable normalization constants. However, standard MCMC algorithms do not apply to doubly-intractable distributions in which there are unknown, non-constant normalization terms; for example, the posterior over parameters of an undirected graphical model. An ingenious auxiliary-variable scheme (Møller et al., Biometrika 93(2):451–458, 2006) offered the first valid MCMC algorithm for this problem. Exact sampling (Propp and Wilson, Rand. Struct. Alg. 9(1&2):223–252 1996) is used to sample from a Metropolis–Hastings proposal for which the acceptance probability is tractable. Unfortunately these expensive proposals can have a low acceptance rate.

We recently (Proc. UAI 2006) generalized the Møller et al. algorithm and introduced an easier-to-implement alternative, which often performs better. Here we describe more general versions of these algorithms with simpler derivations.

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