Presented by:
Frank Noe
Date:
Tuesday 21st June 2016 - 11:00 to 11:45
Venue:
INI Seminar Room 1
Abstract:
We have introduced interacting-particle reaction-diffusion (iPRD) simulations
as a hybrid between molecular dynamics simulations and particle-based
reaction-diffusion simulations. iPRD is a suitable modeling framework for many
cellular signaling processes, especially such processes involving dense protein
mixtures, supramolecular architectures or protein scaffolds at membranes. I will
introduce to the theory behind iPRD and present computational algorithms.
One of our key application areas is clathrin-mediated endocytosis in neurons, and I will briefly elude to simulations of protein recruitment to clathrin-coated pits and the interplay between membrane-associated proteins and membrane deformation in endocytosis.
Related Links
One of our key application areas is clathrin-mediated endocytosis in neurons, and I will briefly elude to simulations of protein recruitment to clathrin-coated pits and the interplay between membrane-associated proteins and membrane deformation in endocytosis.
Related Links
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