UMC
11 August 2014 to 19 December 2014
The importance of microbial communities for health, industry and the natural environment cannot be overstated. Despite this, there is an enormous gap between the levels of our empirical knowledge of microbial communities composition and experimental and theoretical understanding of their function, structure, and dynamics. Developing and advancing mathematical and computational approaches for the study of microbial communities has huge potentials for this field. The aim of this programme is to build an interactive community of theoretical and empirical scientists that can provide these developments.
The Institute kindly requests that any papers published as a result of this programme’s activities are credited as such. Please acknowledge the support of the Institute in your paper using the following text:
The author(s) would like to thank the Isaac Newton Institute for Mathematical Sciences, Cambridge, for support and hospitality during the programme Understanding microbial communities; function, structure and dynamics, where work on this paper was undertaken. This work was supported by EPSRC grant EP/K032208/1.
Click here to download the programme's final scientific report
Title | Year | Programme | Publication Date |
---|---|---|---|
Lyapunov functions, stationary distributions, and non-equilibrium potential for chemical reaction networksAuthors: DF Anderson, G Cracium, M Gopalkrishnan, C Wiuf |
2014 | UMC | 21 October 2016 |
Finding the positive feedback loops underlying multi-stationarityAuthors: E Feliu, C Wiuf |
2014 | UMC | 21 October 2016 |
Saccharomyces cerevisiae: a nomadic yeast with no niche?Authors: Matthew R Goddard, D Greig |
2014 | UMC | 21 October 2016 |
18 August 2014 to 22 August 2014
10 September 2014 to 12 September 2014
27 October 2014 to 29 October 2014
26 November 2014 to 28 November 2014
10 October 2022 to 14 October 2022
Sunday 21st August 2011 | |||
---|---|---|---|
15:00 to 16:00 |
Chaos in biology: Experiments, implications and mathematical tools |
Room 2 |
Tuesday 12th August 2014 | |||
---|---|---|---|
14:00 to 15:00 | Room 2 | ||
15:00 to 16:00 |
A Non-exchangeable Coalescent Process Arising In Phylogenetics |
Room 2 |
Thursday 21st August 2014 | |||
---|---|---|---|
14:00 to 15:00 | Room 2 | ||
15:00 to 16:00 |
Chaos in biology: Experiments, implications and mathematical tools |
Room 2 |
Tuesday 26th August 2014 | |||
---|---|---|---|
14:00 to 15:00 |
Catalytic origami: Genetic tools and strategies for assembling 3D bacterial consortia |
Room 2 |
Thursday 28th August 2014 | |||
---|---|---|---|
14:00 to 15:00 |
Life on the edge - microbial evolution in the presence of drug gradients |
Room 2 |
Tuesday 2nd September 2014 | |||
---|---|---|---|
14:00 to 15:00 |
Understanding reactions of introduced bacteria in natural and engineered environments |
Room 2 | |
15:00 to 16:00 | Room 2 |
Thursday 4th September 2014 | |||
---|---|---|---|
14:00 to 15:00 | Room 2 | ||
15:00 to 16:00 |
Theory of adaptive evolution informed by microbial experiments |
Room 2 |
Friday 5th September 2014 | |||
---|---|---|---|
14:00 to 17:00 | Discussion Room |
Monday 8th September 2014 | |||
---|---|---|---|
10:30 to 12:00 | Room 2 | ||
16:00 to 17:00 | Room 1 | ||
17:30 to 18:30 | No Room Required |
Tuesday 9th September 2014 | |||
---|---|---|---|
09:30 to 10:30 | Room 1 |
Thursday 11th September 2014 | |||
---|---|---|---|
14:00 to 14:35 | Room 1 | ||
14:35 to 15:10 |
Plenary Lecture 11: Modelling the emergent dynamics of human colonic microbiota |
Room 1 | |
15:10 to 15:25 | Room 1 |
Monday 15th September 2014 | |||
---|---|---|---|
10:30 to 12:00 | Room 2 |
Tuesday 16th September 2014 | |||
---|---|---|---|
14:00 to 15:00 |
Biology of Integrative and Conjugative Elements (special agents of bacterial evolution) |
Room 2 | |
15:00 to 16:00 | Room 2 |
Thursday 18th September 2014 | |||
---|---|---|---|
14:00 to 14:30 | Room 2 | ||
14:30 to 15:00 |
Computational tools for the taxonomic analysis of shotgun metagenome samples |
Room 2 | |
15:00 to 15:30 |
Gaining Insights into the Uncultured Microbial World by Computational Metagenome Analysis |
Room 2 | |
15:30 to 16:00 | Room 2 |
Monday 22nd September 2014 | |||
---|---|---|---|
10:30 to 12:00 | Room 2 |
Thursday 25th September 2014 | |||
---|---|---|---|
14:00 to 15:00 | Room 2 |
Monday 29th September 2014 | |||
---|---|---|---|
10:30 to 12:00 | Room 2 |
Tuesday 30th September 2014 | |||
---|---|---|---|
14:00 to 15:00 |
Colorful niches of phototrophic microorganisms shaped by vibrations of the water molecule |
Room 2 |
Monday 6th October 2014 | |||
---|---|---|---|
10:30 to 12:00 | Room 2 |
Tuesday 7th October 2014 | |||
---|---|---|---|
14:00 to 15:00 |
Predictability and Unpredictability in nutrient-cycling microbial ecosystems |
Room 2 | |
15:00 to 16:00 | Room 2 |
Thursday 9th October 2014 | |||
---|---|---|---|
09:30 to 12:30 | Room 2 |
Monday 13th October 2014 | |||
---|---|---|---|
10:30 to 12:00 | Room 2 |
Monday 20th October 2014 | |||
---|---|---|---|
15:00 to 16:00 |
Experimentally Quantifying Patterns in Microbial Eukaryote Populations |
Room 2 | |
16:00 to 17:00 | Room 1 |
Tuesday 21st October 2014 | |||
---|---|---|---|
14:00 to 15:00 |
Outstanding Questions in the Ecology and Evolution of Coral Reef Microbes |
Room 2 |
Wednesday 29th October 2014 | |||
---|---|---|---|
10:30 to 10:45 |
Contributed Talk 7: Social evolution of toxic metal bioremediation in P.aeruginosa |
Room 1 | |
14:00 to 15:00 | Room 1 |
Thursday 30th October 2014 | |||
---|---|---|---|
09:30 to 10:05 |
Plenary Lecture 1: Non-Equilibrium Dynamics in Ecological Communities |
Room 1 | |
10:40 to 10:55 | Room 1 | ||
16:30 to 17:05 | Room 1 |
Monday 3rd November 2014 | |||
---|---|---|---|
09:00 to 17:00 | Discussion Room | ||
10:30 to 12:00 | Room 1 |
Tuesday 4th November 2014 | |||
---|---|---|---|
10:00 to 10:05 | Room 1 | ||
10:05 to 10:20 | Room 1 | ||
10:20 to 10:35 | Room 1 | ||
10:35 to 10:50 | Room 1 | ||
10:50 to 11:15 | No Room Required | ||
11:15 to 11:30 |
Importance of Standardising Genome-Scale Stoichiometric Models |
Room 1 | |
11:30 to 11:45 | Room 1 | ||
11:45 to 12:00 |
Constraint-based modeling of microbial communities and their interaction with the host |
Room 1 | |
12:00 to 13:00 | No Room Required | ||
13:00 to 13:15 |
Exchanging stoichiometric models: interoperability at genome scale |
Room 1 | |
13:15 to 13:30 | Room 1 | ||
13:30 to 13:45 | Room 1 | ||
13:45 to 14:00 | Room 1 | ||
14:00 to 14:30 | No Room Required | ||
14:30 to 17:00 | Room 1 |
Wednesday 5th November 2014 | |||
---|---|---|---|
14:00 to 15:00 |
Energetic feedback on chromatin state defines a system-wide reset point |
Room 1 | |
15:00 to 16:00 |
Interaction driven spatial patterning in microbial communities |
Room 1 |
Thursday 6th November 2014 | |||
---|---|---|---|
14:00 to 15:00 | Room 2 | ||
15:00 to 16:00 |
How microbial communities drove the evolution of the genetic code more than 3.8 billion years ago |
Room 2 |
Thursday 13th November 2014 | |||
---|---|---|---|
14:00 to 15:00 | Room 2 | ||
15:00 to 16:00 |
Omics approaches reveal how chemistry governs the biology of cystic fibrosis lung infections |
Room 2 |
Friday 14th November 2014 | |||
---|---|---|---|
11:00 to 12:00 |
Modelling Macro Ecological Patterns: Neutral Theory and Beyond |
Room 2 |
Monday 17th November 2014 | |||
---|---|---|---|
10:30 to 12:00 | Room 2 |
Friday 21st November 2014 | |||
---|---|---|---|
14:00 to 15:00 | Room 2 |
Monday 24th November 2014 | |||
---|---|---|---|
10:30 to 12:00 | Room 2 | ||
17:00 to 18:00 | No Room Required |
Tuesday 25th November 2014 | |||
---|---|---|---|
14:00 to 17:00 | Room 1 | ||
14:00 to 15:00 |
The role of immune selection on the population structure of metabolic genes in pathogenic bacteria |
Room 2 | |
15:00 to 16:00 |
Spiralling patterns in models inspired by bacterial games with cyclic competition |
Room 2 |
Monday 1st December 2014 | |||
---|---|---|---|
10:30 to 12:00 | Room 2 |
Wednesday 3rd December 2014 | |||
---|---|---|---|
16:30 to 17:00 | Discussion Room |
Thursday 4th December 2014 | |||
---|---|---|---|
13:30 to 13:45 | Room 1 |
Monday 8th December 2014 | |||
---|---|---|---|
10:30 to 12:00 | Room 2 |
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